국립순천대학교천연물의약산업융합전공

학력

• 연세대학교 (학사)
• 서울대학교 (석사)
• POSTECH (박사)

주요경력

• Univ. of California, Berkeley 박사후 연구원
• 삼성전기 중앙연구소 책임연구원

세부연구분야

• 펨토초 분광학 & 동력학
• Raman 분광학

주요연구실적

• Development of a Tunable Femtosecond Stimulated Raman Apparatus and its Application to b-Carotene. J. Phys. Chem. B, 2008, 112, 4826.
• Femtosecond Stimulated Raman Reveals the Birth of Bacteriorhodopsin's J and K Intermediates. J. Am. Chem. Soc., 2009, 131, 7592.
• Surface-Enhanced Raman Scattering of Single- and Few-SLayer Graphene by the Deposition of Gold Nanoparticles. SChem. Eur. J. 2011, 17, 2381.

학력

• 서울대학교 화학부 (학사, 2004-2008)
• 서울대학교 화학부 (물리화학, 박사, 2008-2014)

주요경력

• 서울대학교 기초과학연구소 연수연구원 (2014.3 - 2014.7)
• 퍼듀 대학교 생명과학부 박사 후 연구원 (2014.7-2019.3)

연구분야

• 단백질-리간드 상호작용 예측 프로그램 개발 및 응용
• 분자 동력학 시뮬레이션을 이용한 생체 분자 구조 변화 연구

주요연구실적

논문발표

• LigDockCSA: Protein-Ligand Docking Using Conformational Space Annealing, Journal of Computational Chemistry, 2011, 32, 3226.
• GalaxyDock: Protein-Ligand Docking with Flexible Protein Side-chains, Journal of Chemical Information and Modeling, 2012, 52, 3225.
• GalaxyDock2: Protein-Ligand Docking using Beta-Complex and Global Optimization, Journal of Computational Chemistry, 2013, 34, 2647.(Selected as an inside cover of JCC)
• Prediction of Protein Structure and Interaction by GALAXY protein modeling programs, Bio Design, 2014, 2, 1.
• Three-dimensional compound comparison methods and their application in drug discovery, Molecules, 2015, 20, 12841.
• PatchSurfers: Two methods for local molecular property-based binding ligand prediction, Methods, 2016, 93, 41.
• Evaluation of GalaxyDock Based on the Community Structure-Activity Resource 2013 and 2014 Benchmark Studies, Journal of Chemical Information and Modeling, 2016, 56, 988. (Selected as a collage cover article)
• PL-PatchSurfer2: Improved Virtual Screening Method Using Local Surface Matching that is Tolerant to Target and Ligand Structure Variation, Journal of Chemical Information and Modeling, 2016, 56, 1676.
• Discovery of Nicotinamide Adenine Dinucleotide Binding Proteinsin the Escherichia coli Proteome Using a Combined Energetic- andStructural-Bioinformatics-Based Approach, J. Proteome Res., 16, 2017, 470.
• Prediction of Local Quality of Protein Structure Models Considering Spatial Neighbors in Graphical Models Scientific Reports, 2017, 7, 40629.
• Discovery of Protein-Ligand Interactions by a Combined Energetic-Based and Structural-Bioinformatics-Based Approach, Journal of Proteome Research, 2017, 16, 470.
• In Silico Structure-Based Approaches to Discover Protein-Protein Interaction-Targeting Drugs
  Methods, 2017, 131, 22
• Virtual ligand screening using PL-PatchSurfer2, a molecular surface-based protein-ligand docking method (Book Chapter),  Methods in Molecular Biology, 2018, 1762. 105.
• 55 years of the Rossmann fold (Book Chapter), Methods in Molecular Biology, 2019, 1958, 1.
• Predicting binding poses and affinity ranking in D3R Grand Challenge using PL-PatchSurfer2.0, Journal of Computer-Aided Molecular Design, 2019, 33, 1083.